Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HY78_RS25290 | Not Available | + | 5359848 - 5360180 | 11871.3 |
| type iv secretion system dna-binding domain-containing protein | HY78_RS25295 | Not Available | + | 5360170 - 5362566 | 88121.8 |
| mobf family relaxase | HY78_RS25300 | Not Available | + | 5362604 - 5365531 | 106205.0 |
| is1380 family transposase | HY78_RS25305 | Not Available | + | 5365640 - 5367010 | 50239.4 |
| hypothetical protein | HY78_RS25310 | Not Available | + | 5367251 - 5367490 | 8602.31 |
| duf6961 family protein | HY78_RS25315 | Not Available | - | 5367515 - 5367712 | 7085.37 |
| duf5818 domain-containing protein | HY78_RS25320 | Not Available | - | 5367712 - 5368017 | 10778.9 |
| thermonuclease family protein | HY78_RS25325 | Not Available | - | 5368014 - 5368439 | 14838.9 |
| helix-turn-helix transcriptional regulator | HY78_RS25330 | Not Available | - | 5368452 - 5369093 | 23683.4 |
| hypothetical protein | HY78_RS25335 | Not Available | + | 5369200 - 5369388 | 7187.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.