Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook capping flgd n-terminal domain-containing protein | HY78_RS24290 | Not Available | + | 5146623 - 5147057 | 15199.9 |
| flagellar hook-basal body complex protein | HY78_RS24295 | Not Available | + | 5147059 - 5147988 | 32379.3 |
| is1380 family transposase | HY78_RS24300 | Not Available | + | 5148083 - 5149432 | 49607.8 |
| lysm peptidoglycan-binding domain-containing protein | HY78_RS24305 | Not Available | - | 5149534 - 5152314 | 95646.2 |
| type ii toxin-antitoxin system rele/pare family toxin | HY78_RS24310 | Not Available | + | 5152217 - 5152633 | 14910.7 |
| nads family protein | HY78_RS24315 | Not Available | + | 5152651 - 5152941 | 10426.5 |
| smi1/knr4 family protein | HY78_RS24320 | Not Available | - | 5153366 - 5153899 | 19918.5 |
| dna/rna non-specific endonuclease | HY78_RS24325 | Not Available | - | 5153893 - 5155365 | 50434.2 |
| transposase | HY78_RS24330 | Not Available | - | 5155843 - 5157207 | 50390.6 |
| lysm peptidoglycan-binding domain-containing protein | HY78_RS24335 | Not Available | - | 5157247 - 5165778 | 303959.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.