Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | HY78_RS24090 | Not Available | - | 5100909 - 5101457 | 19476.6 |
| signal peptide peptidase sppa | HY78_RS24095 | Not Available | - | 5101442 - 5103322 | 65106.5 |
| transglutaminase-like domain-containing protein | HY78_RS24100 | Not Available | - | 5103397 - 5104224 | 30151.7 |
| alpha-e domain-containing protein | HY78_RS24105 | Not Available | - | 5104226 - 5105161 | 34543.3 |
| circularly permuted type 2 atp-grasp protein | HY78_RS24110 | Not Available | - | 5105161 - 5106606 | 52477.6 |
| lytic transglycosylase domain-containing protein | HY78_RS24115 | Not Available | - | 5106902 - 5108950 | 74462.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | HY78_RS24120 | Not Available | + | 5108997 - 5109872 | 30697.7 |
| ssra-binding protein smpb | HY78_RS24125 | Not Available | + | 5109934 - 5110416 | 18740.4 |
| duf2062 domain-containing protein | HY78_RS24130 | Not Available | + | 5110428 - 5111003 | 21200.2 |
| m13 family metallopeptidase | HY78_RS24135 | Not Available | + | 5111062 - 5113107 | 75696.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.