Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i restriction enzyme endonuclease domain-containing protein | HY78_RS23340 | Not Available | + | 4945896 - 4946501 | 22320.2 |
| m48 family metallopeptidase | HY78_RS23345 | Not Available | + | 4946501 - 4947262 | 28994.7 |
| site-specific integrase | HY78_RS23350 | Not Available | - | 4947254 - 4948756 | 56264.9 |
| Trna-leu | Not Available | Not Available | + | 4948852 - 4948938 | Not Available |
| nad(p)h-binding protein | HY78_RS23360 | Not Available | + | 4949040 - 4949978 | 32111.7 |
| undecaprenyl-diphosphate phosphatase | HY78_RS23365 | Not Available | + | 4949987 - 4950787 | 28237.6 |
| nad(p)-dependent oxidoreductase | HY78_RS23370 | Not Available | + | 4950951 - 4952408 | 52471.5 |
| duf2059 domain-containing protein | HY78_RS23375 | Not Available | + | 4952405 - 4952950 | 20119.8 |
| glutamate synthase large subunit | HY78_RS23380 | Not Available | + | 4952960 - 4957489 | 165131.0 |
| hypothetical protein | HY78_RS23385 | Not Available | + | 4957715 - 4957999 | 9906.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.