Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methanol/ethanol family pqq-dependent dehydrogenase | HY78_RS23240 | Not Available | - | 4922156 - 4923895 | 62164.5 |
| substrate-binding periplasmic protein | HY78_RS23245 | Not Available | - | 4923991 - 4924848 | 29866.1 |
| cytochrome c-550 pedf | HY78_RS23250 | Not Available | - | 4924845 - 4925270 | 15064.8 |
| pqq-dependent catabolism-associated beta-propeller protein | HY78_RS23255 | Not Available | + | 4925418 - 4926374 | 33753.3 |
| hypothetical protein | HY78_RS23260 | Not Available | + | 4926493 - 4927872 | 47478.9 |
| acetate--coa ligase | HY78_RS23265 | Not Available | + | 4927979 - 4929934 | 71012.4 |
| tonb-dependent receptor | HY78_RS23270 | Not Available | + | 4929993 - 4932305 | 82036.6 |
| quinoprotein relay system zinc metallohydrolase 1 | HY78_RS23275 | Not Available | - | 4932341 - 4933294 | 33862.6 |
| quinoprotein dehydrogenase-associated soxyz-like carrier | HY78_RS23280 | Not Available | - | 4933291 - 4934091 | 28519.4 |
| rhodanese | HY78_RS23285 | Not Available | + | 4934167 - 4934715 | 19842.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.