Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aromatic-ring-hydroxylating dioxygenase subunit beta | HY78_RS22990 | Not Available | + | 4858180 - 4858695 | 19382.2 |
| 2-keto-4-pentenoate hydratase | HY78_RS22995 | Not Available | + | 4858816 - 4859661 | 28485.7 |
| marr family winged helix-turn-helix transcriptional regulator | HY78_RS23000 | Not Available | - | 4859677 - 4860150 | 17925.5 |
| sdr family nad(p)-dependent oxidoreductase | HY78_RS23005 | Not Available | - | 4860218 - 4860973 | 25543.5 |
| hypothetical protein | HY78_RS23010 | Not Available | - | 4860970 - 4861329 | 13409.3 |
| acyl-coa dehydrogenase family protein | HY78_RS23015 | Not Available | - | 4861348 - 4862508 | 40855.9 |
| spinster family mfs transporter | HY78_RS23020 | Not Available | - | 4862620 - 4863933 | 44893.9 |
| nad/nadp octopine/nopaline dehydrogenase family protein | HY78_RS23025 | Not Available | + | 4864185 - 4865267 | 39010.5 |
| 3-hydroxybutyryl-coa dehydrogenase | HY78_RS23030 | Not Available | + | 4865254 - 4866252 | 34985.0 |
| fad-binding oxidoreductase | HY78_RS23035 | Not Available | + | 4866252 - 4867607 | 47069.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.