Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1,2-phenylacetyl-coa epoxidase subunit paaa | HY78_RS22940 | Not Available | - | 4847386 - 4848384 | 37101.9 |
| 3-oxoadipyl-coa thiolase | HY78_RS22945 | Not Available | - | 4848489 - 4849688 | 41275.8 |
| hydroxyphenylacetyl-coa thioesterase paai | HY78_RS22950 | Not Available | - | 4849681 - 4850130 | 15743.6 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | HY78_RS22955 | Not Available | - | 4850127 - 4851596 | 50102.9 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase paag | HY78_RS22960 | Not Available | + | 4851701 - 4852492 | 27986.7 |
| phenylacetic acid degradation bifunctional protein paaz | HY78_RS22965 | Not Available | + | 4852525 - 4854552 | 71914.3 |
| marr family winged helix-turn-helix transcriptional regulator | HY78_RS22970 | Not Available | - | 4854679 - 4855155 | 18021.6 |
| amidase | HY78_RS22975 | Not Available | + | 4855234 - 4856382 | 38907.8 |
| nuclear transport factor 2 family protein | HY78_RS22980 | Not Available | + | 4856379 - 4856930 | 20263.9 |
| aromatic ring-hydroxylating oxygenase subunit alpha | HY78_RS22985 | Not Available | + | 4856927 - 4858183 | 46897.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.