Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | HY78_RS22290 | Not Available | - | 4707455 - 4707805 | 12767.2 |
| replication-associated recombination protein a | HY78_RS22295 | Not Available | - | 4707802 - 4709118 | 47360.5 |
| padr family transcriptional regulator | HY78_RS22300 | Not Available | + | 4709247 - 4709873 | 22475.0 |
| duf2218 domain-containing protein | HY78_RS22305 | Not Available | + | 4709882 - 4710202 | 11511.3 |
| glycosyltransferase family 4 protein | HY78_RS22310 | Not Available | - | 4710219 - 4711400 | 43835.0 |
| low affinity iron permease family protein | HY78_RS22315 | Not Available | + | 4711546 - 4711956 | 15363.5 |
| methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfo | HY78_RS22320 | Not Available | - | 4712069 - 4713406 | 47676.3 |
| entericidin a/b family lipoprotein | HY78_RS22325 | Not Available | - | 4713918 - 4714049 | 4454.52 |
| winged helix-turn-helix domain-containing protein | HY78_RS22330 | Not Available | - | 4714131 - 4715615 | 55377.2 |
| ybhb/ybcl family raf kinase inhibitor-like protein | HY78_RS22335 | Not Available | + | 4715726 - 4716349 | 21373.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.