Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | HY78_RS21940 | Not Available | + | 4627131 - 4629518 | 86091.2 |
| duf1330 domain-containing protein | HY78_RS21945 | Not Available | - | 4629584 - 4629880 | 11382.4 |
| nuclear transport factor 2 family protein | HY78_RS21950 | Not Available | - | 4629921 - 4630421 | 18929.4 |
| m24 family metallopeptidase | HY78_RS21955 | Not Available | - | 4630452 - 4631654 | 43031.6 |
| questin oxidase family protein | HY78_RS21960 | Not Available | - | 4631676 - 4632758 | 39817.4 |
| iclr family transcriptional regulator | HY78_RS21965 | Not Available | - | 4632868 - 4633608 | 26358.7 |
| tonb-dependent receptor | HY78_RS21970 | Not Available | + | 4633856 - 4636252 | 86418.8 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | HY78_RS21975 | Not Available | + | 4636418 - 4637461 | 38296.5 |
| fad-dependent oxidoreductase | HY78_RS21980 | Not Available | + | 4637533 - 4639473 | 68241.1 |
| ester cyclase | HY78_RS21985 | Not Available | + | 4639496 - 4639909 | 15628.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.