Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| catechol 1,2-dioxygenase | HY78_RS21640 | Not Available | - | 4562478 - 4563410 | 34022.8 |
| muconolactone delta-isomerase | HY78_RS21645 | Not Available | - | 4563441 - 4563731 | 11175.4 |
| muconate/chloromuconate family cycloisomerase | HY78_RS21650 | Not Available | - | 4563731 - 4564918 | 42753.6 |
| lysr family transcriptional regulator | HY78_RS21655 | Not Available | + | 4564995 - 4565894 | 33546.0 |
| aromatic ring-hydroxylating oxygenase subunit alpha | HY78_RS21660 | Not Available | - | 4565898 - 4567088 | 44967.5 |
| hypothetical protein | HY78_RS21665 | Not Available | - | 4567085 - 4567441 | 13220.8 |
| aspartate/glutamate racemase family protein | HY78_RS21670 | Not Available | + | 4567691 - 4568431 | 26525.0 |
| arac family transcriptional regulator | HY78_RS21675 | Not Available | + | 4568463 - 4569494 | 38123.6 |
| non-heme iron oxygenase ferredoxin subunit | HY78_RS21680 | Not Available | - | 4569609 - 4569914 | 10964.8 |
| nuclear transport factor 2 family protein | HY78_RS21685 | Not Available | - | 4569911 - 4570399 | 17892.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.