Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | HY78_RS20790 | Not Available | - | 4355490 - 4356119 | 22335.4 |
| response regulator | HY78_RS20795 | Not Available | + | 4356204 - 4356899 | 24376.1 |
| formyltetrahydrofolate deformylase | HY78_RS20800 | Not Available | + | 4356961 - 4357815 | 31028.4 |
| m1 family metallopeptidase | HY78_RS20805 | Not Available | - | 4357963 - 4360590 | 93249.2 |
| sensor domain-containing diguanylate cyclase | HY78_RS20810 | Not Available | - | 4360666 - 4362483 | 67576.6 |
| efflux transporter outer membrane subunit | HY78_RS20815 | Not Available | - | 4362570 - 4363991 | 49978.2 |
| efflux rnd transporter permease subunit | HY78_RS20820 | Not Available | - | 4364003 - 4367188 | 113534.0 |
| efflux rnd transporter periplasmic adaptor subunit | HY78_RS20825 | Not Available | - | 4367284 - 4368564 | 45328.0 |
| rok family protein | HY78_RS20830 | Not Available | + | 4368729 - 4369655 | 31603.0 |
| fadr/gntr family transcriptional regulator | HY78_RS20835 | Not Available | - | 4369643 - 4370416 | 27944.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.