Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | HY78_RS20740 | Not Available | - | 4335508 - 4337865 | 85863.2 |
| llm class flavin-dependent oxidoreductase | HY78_RS20745 | Not Available | - | 4338225 - 4339325 | 39902.6 |
| arac family transcriptional regulator | HY78_RS20750 | Not Available | - | 4339590 - 4340594 | 37095.3 |
| transketolase | HY78_RS20755 | Not Available | - | 4340762 - 4343104 | 84335.3 |
| lrp/asnc family transcriptional regulator | HY78_RS20760 | Not Available | + | 4343273 - 4343731 | 16860.3 |
| sirb1 family protein | HY78_RS20765 | Not Available | + | 4343728 - 4344534 | 29042.6 |
| penicillin-binding protein 1c | HY78_RS20770 | Not Available | - | 4344573 - 4346690 | 75484.9 |
| alpha-2-macroglobulin family protein | HY78_RS20775 | Not Available | - | 4346701 - 4352433 | 205160.0 |
| response regulator | HY78_RS20780 | Not Available | - | 4352627 - 4353007 | 13767.8 |
| chase3 domain-containing protein | HY78_RS20785 | Not Available | - | 4353004 - 4355493 | 90781.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.