Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine phosphate synthase | HY78_RS09805 | Not Available | + | 2015526 - 2016293 | 26669.4 |
| hypothetical protein | HY78_RS09810 | Not Available | - | 2016334 - 2016837 | 17456.2 |
| phosphoribosylamine--glycine ligase | HY78_RS09815 | Not Available | - | 2016870 - 2018171 | 44800.4 |
| exodeoxyribonuclease vii large subunit | HY78_RS09820 | Not Available | + | 2018170 - 2019648 | 53608.2 |
| duf2093 domain-containing protein | HY78_RS09825 | Not Available | + | 2019691 - 2019888 | 7093.53 |
| m23 family metallopeptidase | HY78_RS09830 | Not Available | + | 2019885 - 2020784 | 31270.0 |
| hypothetical protein | HY78_RS09835 | Not Available | - | 2021036 - 2021572 | 19088.8 |
| tonb-dependent receptor | HY78_RS09840 | Not Available | + | 2021747 - 2023708 | 70500.4 |
| is1595 family transposase | HY78_RS09845 | Not Available | + | 2023784 - 2024806 | 37810.0 |
| sulfonate abc transporter permease | HY78_RS09850 | Not Available | + | 2024819 - 2026027 | 43359.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.