Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| shlb/fhac/hecb family hemolysin secretion/activation protein | HY78_RS09605 | Not Available | - | 1978528 - 1980297 | 64346.8 |
| tonb-dependent receptor plug domain-containing protein | HY78_RS09610 | Not Available | + | 1980798 - 1982669 | 67942.5 |
| response regulator transcription factor | HY78_RS09615 | Not Available | - | 1982932 - 1983558 | 22333.2 |
| response regulator | HY78_RS09620 | Not Available | + | 1984246 - 1984656 | 14625.4 |
| chemotaxis protein cheb | HY78_RS09625 | Not Available | + | 1984670 - 1985746 | 37673.6 |
| hypothetical protein | HY78_RS09630 | Not Available | + | 1985761 - 1986018 | 8873.64 |
| glycosyltransferase | HY78_RS09635 | Not Available | - | 1986015 - 1987217 | 42844.1 |
| gfo/idh/moca family oxidoreductase | HY78_RS09640 | Not Available | - | 1987214 - 1988131 | 32422.2 |
| gfo/idh/moca family protein | HY78_RS09645 | Not Available | - | 1988128 - 1989258 | 40563.5 |
| helix-turn-helix domain-containing protein | HY78_RS09650 | Not Available | + | 1989406 - 1990002 | 21621.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.