Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2274 domain-containing protein | HY78_RS07625 | Not Available | + | 1595828 - 1596043 | 7772.67 |
| helix-turn-helix domain-containing protein | HY78_RS07630 | Not Available | + | 1596512 - 1596901 | 14429.9 |
| recombinase family protein | HY78_RS07635 | Not Available | + | 1596898 - 1598544 | 61226.6 |
| imma/irre family metallo-endopeptidase | HY78_RS07640 | Not Available | - | 1598779 - 1599222 | 16217.3 |
| helix-turn-helix domain-containing protein | HY78_RS07645 | Not Available | - | 1599342 - 1599689 | 12412.2 |
| duf2188 domain-containing protein | HY78_RS07650 | Not Available | + | 1599875 - 1600099 | 8188.36 |
| is21-like element helper atpase istb | HY78_RS07655 | Not Available | - | 1600595 - 1601323 | 26672.3 |
| is21 family transposase | HY78_RS07660 | Not Available | - | 1601310 - 1602824 | 57437.9 |
| is1380 family transposase | HY78_RS07665 | Not Available | + | 1603322 - 1604671 | 49607.8 |
| helix-turn-helix transcriptional regulator | HY78_RS07670 | Not Available | - | 1604983 - 1605204 | 8311.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.