Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer atpase trbb | HY78_RS07575 | Not Available | + | 1586437 - 1587420 | 34609.8 |
| trbc/virb2 family protein | HY78_RS07580 | Not Available | + | 1587417 - 1587749 | 11340.0 |
| virb3 family type iv secretion system protein | HY78_RS07585 | Not Available | + | 1587749 - 1588030 | 9996.58 |
| conjugal transfer protein trbe | HY78_RS07590 | Not Available | + | 1588041 - 1590533 | 90748.2 |
| p-type conjugative transfer protein trbj | HY78_RS07595 | Not Available | + | 1590530 - 1591306 | 27671.8 |
| putative entry exclusion protein trbk-alt | HY78_RS07600 | Not Available | + | 1591317 - 1591601 | 10204.2 |
| p-type conjugative transfer protein trbl | HY78_RS07605 | Not Available | + | 1591605 - 1592984 | 45108.5 |
| conjugal transfer protein trbf | HY78_RS07610 | Not Available | + | 1592981 - 1593670 | 25912.5 |
| p-type conjugative transfer protein trbg | HY78_RS07615 | Not Available | + | 1593667 - 1594680 | 36403.6 |
| trbi/virb10 family protein | HY78_RS07620 | Not Available | + | 1594728 - 1595825 | 38706.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.