Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | HY78_RS06675 | Not Available | - | 1391560 - 1392588 | 38159.9 |
| 3-hydroxyanthranilate 3,4-dioxygenase | HY78_RS06680 | Not Available | - | 1392588 - 1393139 | 20464.5 |
| rida family protein | HY78_RS06685 | Not Available | - | 1393136 - 1393567 | 15386.3 |
| 2-keto-4-pentenoate hydratase | HY78_RS06690 | Not Available | - | 1393564 - 1394337 | 27196.9 |
| 2-keto-4-pentenoate hydratase | HY78_RS06695 | Not Available | - | 1394334 - 1395125 | 27119.8 |
| 2-hydroxymuconic semialdehyde dehydrogenase | HY78_RS06700 | Not Available | - | 1395122 - 1396612 | 53591.0 |
| lysr family transcriptional regulator | HY78_RS06705 | Not Available | + | 1396695 - 1397660 | 34739.0 |
| lrp/asnc ligand binding domain-containing protein | HY78_RS06710 | Not Available | - | 1397633 - 1397914 | 10707.9 |
| hypothetical protein | HY78_RS06715 | Not Available | - | 1398005 - 1399114 | 38449.3 |
| flp pilus assembly protein cpab | HY78_RS06720 | Not Available | + | 1399652 - 1400533 | 29905.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.