Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | HY78_RS06175 | Not Available | + | 1288669 - 1289847 | 43315.4 |
| helix-turn-helix domain-containing protein | HY78_RS06180 | Not Available | + | 1289986 - 1290792 | 29223.9 |
| succinyl-diaminopimelate desuccinylase | HY78_RS06185 | Not Available | - | 1290789 - 1291922 | 39569.5 |
| glutathione s-transferase family protein | HY78_RS06190 | Not Available | - | 1292149 - 1292823 | 25244.8 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | HY78_RS06195 | Not Available | - | 1292899 - 1293561 | 24186.2 |
| membrane protein insertase yidc | HY78_RS06200 | Not Available | - | 1293558 - 1295291 | 63510.7 |
| membrane protein insertion efficiency factor yidd | HY78_RS06205 | Not Available | - | 1295331 - 1295543 | 7707.6 |
| ribonuclease p protein component | HY78_RS06210 | Not Available | - | 1295540 - 1295860 | 11577.5 |
| 50s ribosomal protein l34 | HY78_RS06215 | Not Available | - | 1295878 - 1296012 | 5048.29 |
| duf3251 domain-containing protein | HY78_RS06220 | Not Available | + | 1296248 - 1296748 | 17501.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.