Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbg | HY78_RS05775 | Not Available | - | 1207407 - 1208417 | 36097.0 |
| conjugal transfer protein trbf | HY78_RS05780 | Not Available | - | 1208414 - 1209097 | 25351.0 |
| p-type conjugative transfer protein trbl | HY78_RS05785 | Not Available | - | 1209104 - 1210489 | 45125.0 |
| putative entry exclusion protein trbk-alt | HY78_RS05790 | Not Available | - | 1210486 - 1210788 | 10508.5 |
| p-type conjugative transfer protein trbj | HY78_RS05795 | Not Available | - | 1210797 - 1211513 | 25312.9 |
| conjugal transfer protein trbe | HY78_RS05800 | Not Available | - | 1211510 - 1213972 | 90018.8 |
| virb3 family type iv secretion system protein | HY78_RS05805 | Not Available | - | 1213969 - 1214250 | 9974.31 |
| trbc/virb2 family protein | HY78_RS05810 | Not Available | - | 1214247 - 1214582 | 11428.2 |
| p-type conjugative transfer atpase trbb | HY78_RS05815 | Not Available | - | 1214579 - 1215565 | 34524.0 |
| copg family ribbon-helix-helix protein | HY78_RS05820 | Not Available | - | 1215706 - 1216125 | 15673.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.