Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | HY78_RS05275 | Not Available | - | 1099805 - 1101595 | 64504.9 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | HY78_RS05280 | Not Available | - | 1101619 - 1103925 | 81472.0 |
| thiolase family protein | HY78_RS05285 | Not Available | - | 1103928 - 1105064 | 38812.8 |
| duf2147 domain-containing protein | HY78_RS05290 | Not Available | + | 1105231 - 1105635 | 14478.6 |
| ompp1/fadl family transporter | HY78_RS05295 | Not Available | + | 1105670 - 1106980 | 46031.5 |
| long-chain-fatty-acid--coa ligase | HY78_RS05300 | Not Available | + | 1106998 - 1108713 | 61670.6 |
| merr family transcriptional regulator | HY78_RS05305 | Not Available | + | 1108679 - 1109128 | 17250.0 |
| l,d-transpeptidase family protein | HY78_RS05310 | Not Available | - | 1109289 - 1109795 | 17770.2 |
| gtp cyclohydrolase ii | HY78_RS05315 | Not Available | - | 1109792 - 1110853 | 37172.8 |
| exodeoxyribonuclease iii | HY78_RS05320 | Not Available | - | 1110850 - 1111641 | 30429.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.