Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter substrate-binding protein | HY78_RS04975 | Not Available | + | 1030186 - 1031772 | 57710.2 |
| abc transporter substrate-binding protein | HY78_RS04980 | Not Available | + | 1031769 - 1033256 | 53164.0 |
| duf4112 domain-containing protein | HY78_RS04985 | Not Available | + | 1033292 - 1033735 | 16196.1 |
| dsba family protein | HY78_RS04990 | Not Available | - | 1033745 - 1034506 | 27709.6 |
| m48 family metalloprotease | HY78_RS04995 | Not Available | - | 1034503 - 1035885 | 49101.1 |
| rne/rng family ribonuclease | HY78_RS05000 | Not Available | - | 1035968 - 1038598 | 96398.0 |
| n-acetylmuramoyl-l-alanine amidase | HY78_RS05005 | Not Available | + | 1039075 - 1040310 | 44174.0 |
| penicillin-binding protein 1a | HY78_RS05010 | Not Available | + | 1040607 - 1043081 | 90781.4 |
| peptide chain release factor 2 | HY78_RS05015 | Not Available | + | 1043177 - 1044304 | 41850.9 |
| gnat family n-acetyltransferase | HY78_RS05020 | Not Available | + | 1044304 - 1044807 | 16921.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.