Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | HY78_RS04625 | Not Available | + | 957833 - 958468 | 23770.3 |
| bifunctional | HY78_RS04630 | Not Available | + | 958730 - 961459 | 98605.8 |
| [glutamate--ammonia-ligase] adenylyltransferase | HY78_RS04635 | Not Available | + | 961687 - 963438 | 61515.9 |
| peroxiredoxin | HY78_RS04640 | Not Available | + | 963488 - 963949 | 16518.8 |
| pepsy-associated tm helix domain-containing protein | HY78_RS04645 | Not Available | - | 963944 - 964981 | 38017.7 |
| tonb-dependent receptor | HY78_RS04650 | Not Available | - | 964996 - 967182 | 78443.5 |
| rna pyrophosphohydrolase | HY78_RS04655 | Not Available | - | 967272 - 967748 | 17879.4 |
| alpha/beta hydrolase | HY78_RS04660 | Not Available | - | 967745 - 968695 | 35014.6 |
| histone deacetylase | HY78_RS04665 | Not Available | + | 968731 - 969678 | 33633.0 |
| ferritin-like domain-containing protein | HY78_RS04670 | Not Available | + | 969678 - 970523 | 30977.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.