Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus B4
Accession NumberNC_022247.1
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | VAPA_RS03990 | Not Available | - | 885444 - 886400 | 33653.0 |
| lyse family translocator | VAPA_RS03995 | Not Available | - | 886397 - 886996 | 21081.5 |
| plp-dependent aminotransferase family protein | VAPA_RS04000 | Not Available | + | 887100 - 888515 | 51845.7 |
| pham family polyhydroxyalkanoate granule multifunctional regulatory protein | VAPA_RS04005 | Not Available | + | 888605 - 889306 | 23647.1 |
| fist n-terminal domain-containing protein | VAPA_RS04010 | Not Available | + | 889352 - 890632 | 44470.9 |
| d-amino acid dehydrogenase | VAPA_RS04015 | Not Available | - | 890655 - 891956 | 47199.5 |
| dtdp-glucose 4,6-dehydratase | VAPA_RS04020 | Not Available | + | 892383 - 893465 | 40136.2 |
| dtdp-4-dehydrorhamnose reductase | VAPA_RS04025 | Not Available | + | 893462 - 894352 | 31963.9 |
| glucose-1-phosphate thymidylyltransferase rfba | VAPA_RS04030 | Not Available | + | 894378 - 895274 | 32765.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | VAPA_RS04035 | Not Available | + | 895271 - 895819 | 20080.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.