Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus B4
Accession NumberNC_022247.1
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath small subunit | VAPA_RS03115 | Not Available | - | 692621 - 693139 | 18744.5 |
| type vi secretion system protein tssa | VAPA_RS03120 | Not Available | - | 693212 - 694243 | 36227.3 |
| type vi secretion system lipoprotein tssj | VAPA_RS03125 | Not Available | + | 694315 - 694827 | 18236.1 |
| type vi secretion system protein | VAPA_RS03130 | Not Available | - | 694847 - 695965 | 39871.4 |
| dotu family type iv/vi secretion system protein | VAPA_RS03135 | Not Available | - | 695988 - 697316 | 48435.7 |
| response regulator | VAPA_RS03140 | Not Available | + | 697580 - 698263 | 24147.6 |
| msmeg_0569 family flavin-dependent oxidoreductase | VAPA_RS03145 | Not Available | - | 698284 - 699615 | 48640.5 |
| msmeg_0570 family nitrogen starvation response protein | VAPA_RS03150 | Not Available | - | 699651 - 699935 | 10600.4 |
| sll0787 family air synthase-like protein | VAPA_RS03155 | Not Available | - | 699926 - 700924 | 34913.0 |
| msmeg_0567/sll0786 family nitrogen starvation n-acetyltransferase | VAPA_RS03160 | Not Available | - | 700921 - 701481 | 20662.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.