Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus B4
Accession NumberNC_022247.1
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| murein transglycosylase a | VAPA_RS02970 | Not Available | + | 655281 - 656897 | 56236.3 |
| hypothetical protein | VAPA_RS02975 | Not Available | + | 657002 - 657751 | 27022.3 |
| hypothetical protein | VAPA_RS02980 | Not Available | + | 657780 - 658931 | 40348.4 |
| caspase family protein | VAPA_RS02985 | Not Available | + | 659057 - 661033 | 71127.9 |
| type vi secretion system tube protein hcp | VAPA_RS02990 | Not Available | + | 661068 - 661625 | 20165.7 |
| type vi secretion system accessory protein tagj | VAPA_RS02995 | Not Available | + | 661627 - 662427 | 29429.2 |
| type vi secretion system baseplate subunit tsse | VAPA_RS03000 | Not Available | + | 662430 - 662945 | 19345.3 |
| type vi secretion system baseplate subunit tssf | VAPA_RS03005 | Not Available | + | 662953 - 664845 | 69654.9 |
| type vi secretion system baseplate subunit tssg | VAPA_RS03010 | Not Available | + | 664956 - 665990 | 38579.0 |
| methyltransferase domain-containing protein | VAPA_RS03015 | Not Available | + | 665987 - 667321 | 47670.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.