Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus B4
Accession NumberNC_022247.1
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system inner membrane ring lipoprotein sctj | VAPA_RS30160 | Not Available | + | 654766 - 655572 | 29554.2 |
| hypothetical protein | VAPA_RS30165 | Not Available | + | 655579 - 656280 | 26137.0 |
| type iii secretion system stator protein sctl | VAPA_RS30170 | Not Available | + | 656262 - 656900 | 23106.9 |
| flii/yscn family atpase | VAPA_RS30175 | Not Available | + | 656897 - 658243 | 47725.1 |
| hypothetical protein | VAPA_RS30180 | Not Available | + | 658240 - 658728 | 17901.9 |
| type iii secretion system export apparatus subunit sctt | VAPA_RS30185 | Not Available | + | 658755 - 659537 | 28280.3 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | VAPA_RS30190 | Not Available | + | 659542 - 660573 | 37529.7 |
| helix-turn-helix domain-containing protein | VAPA_RS34965 | Not Available | - | 660627 - 661421 | 28598.0 |
| helix-turn-helix transcriptional regulator | VAPA_RS34970 | Not Available | + | 661824 - 662762 | 34730.1 |
| ylci/ynfo family protein | VAPA_RS30205 | Not Available | + | 663008 - 663298 | 10890.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.