Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus B4
Accession NumberNC_022247.1
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | VAPA_RS30115 | Not Available | + | 635790 - 636524 | 26713.7 |
| duf4781 domain-containing protein | VAPA_RS30120 | Not Available | - | 636567 - 646256 | 342384.0 |
| type iii secretion system export apparatus subunit sctr | VAPA_RS30125 | Not Available | - | 646510 - 647169 | 23949.2 |
| type iii secretion system cytoplasmic ring protein sctq | VAPA_RS30130 | Not Available | - | 647198 - 648313 | 39941.8 |
| type iii secretion system export apparatus subunit sctv | VAPA_RS30135 | Not Available | + | 648626 - 650698 | 74555.5 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | VAPA_RS30140 | Not Available | + | 650743 - 650979 | 8565.81 |
| type iii secretion system outer membrane ring subunit sctc | VAPA_RS30145 | Not Available | + | 650976 - 652754 | 63058.8 |
| fha domain-containing protein | VAPA_RS30150 | Not Available | + | 652757 - 653935 | 41781.6 |
| hypothetical protein | VAPA_RS34660 | Not Available | + | 654081 - 654287 | 6570.51 |
| hypothetical protein | VAPA_RS30155 | Not Available | + | 654345 - 654758 | 14212.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.