Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus B4
Accession NumberNC_022247.1
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | VAPA_RS28290 | Not Available | - | 250763 - 252175 | 51450.9 |
| nad-dependent epimerase/dehydratase family protein | VAPA_RS28295 | Not Available | + | 252297 - 253040 | 25646.7 |
| cupin domain-containing protein | VAPA_RS28300 | Not Available | + | 253037 - 253576 | 18539.2 |
| nudix hydrolase | VAPA_RS28305 | Not Available | - | 253605 - 254045 | 15944.1 |
| lysr substrate-binding domain-containing protein | VAPA_RS28310 | Not Available | - | 254103 - 254999 | 32862.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS28315 | Not Available | + | 255161 - 256132 | 34229.8 |
| dsd1 family plp-dependent enzyme | VAPA_RS28320 | Not Available | + | 256171 - 257286 | 39344.1 |
| n-acyl-d-amino-acid deacylase family protein | VAPA_RS28325 | Not Available | + | 257310 - 258761 | 51642.7 |
| orotidine-5'-phosphate decarboxylase | VAPA_RS28330 | Not Available | + | 258856 - 259554 | 23722.0 |
| merr family transcriptional regulator | VAPA_RS28335 | Not Available | - | 259577 - 260581 | 35197.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.