Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus B4
Accession NumberNC_022247.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | VAPA_RS01125 | Not Available | + | 238948 - 239430 | 17207.3 |
| type vi secretion system accessory protein tagj | VAPA_RS01130 | Not Available | + | 239537 - 240403 | 31073.7 |
| type vi secretion system baseplate subunit tsse | VAPA_RS01135 | Not Available | + | 240433 - 240960 | 19683.5 |
| type vi secretion system baseplate subunit tssf | VAPA_RS01140 | Not Available | + | 240961 - 242832 | 69369.6 |
| type vi secretion system baseplate subunit tssg | VAPA_RS01145 | Not Available | + | 242829 - 243980 | 42477.6 |
| type vi secretion system atpase tssh | VAPA_RS01150 | Not Available | + | 243977 - 246733 | 99585.2 |
| type vi secretion system vgr family protein | VAPA_RS01155 | Not Available | + | 246754 - 249138 | 88104.4 |
| hypothetical protein | VAPA_RS01160 | Not Available | + | 249138 - 249611 | 16733.8 |
| duf2169 domain-containing protein | VAPA_RS01165 | Not Available | + | 249655 - 252207 | 93905.9 |
| pentapeptide repeat-containing protein | VAPA_RS01170 | Not Available | + | 252219 - 253253 | 38142.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.