Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sura n-terminal domain-containing protein | VAPA_RS09255 | Not Available | + | 2009571 - 2011481 | 69423.4 |
| histidine phosphatase family protein | VAPA_RS09260 | Not Available | + | 2011593 - 2012267 | 25099.8 |
| hypothetical protein | VAPA_RS09265 | Not Available | - | 2012295 - 2012627 | 12810.4 |
| glsb/yeaq/ymge family stress response membrane protein | VAPA_RS09270 | Not Available | - | 2012649 - 2012897 | 8393.64 |
| ybhb/ybcl family raf kinase inhibitor-like protein | VAPA_RS09275 | Not Available | + | 2013057 - 2013749 | 24103.8 |
| Trna-his | Not Available | Not Available | + | 2013825 - 2013900 | Not Available |
| h-ns family nucleoid-associated regulatory protein | VAPA_RS09285 | Not Available | + | 2014164 - 2014508 | 12417.8 |
| nadph:quinone oxidoreductase family protein | VAPA_RS09290 | Not Available | - | 2014596 - 2015582 | 34336.8 |
| 5'/3'-nucleotidase sure | VAPA_RS09295 | Not Available | + | 2015711 - 2016469 | 27047.2 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | VAPA_RS09300 | Not Available | + | 2016472 - 2017245 | 27058.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.