Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus B4
Accession NumberNC_022247.1
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide assembly protein lapb | VAPA_RS08430 | Not Available | - | 1843079 - 1844257 | 43385.2 |
| lipopolysaccharide assembly lapa domain-containing protein | VAPA_RS08435 | Not Available | - | 1844247 - 1844585 | 11868.5 |
| integration host factor subunit beta | VAPA_RS08440 | Not Available | - | 1844631 - 1844945 | 11621.0 |
| 30s ribosomal protein s1 | VAPA_RS08445 | Not Available | - | 1845018 - 1846706 | 61880.9 |
| bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase | VAPA_RS08450 | Not Available | - | 1846936 - 1849032 | 74095.0 |
| prephenate dehydrogenase | VAPA_RS08455 | Not Available | - | 1849034 - 1849915 | 31030.4 |
| prephenate dehydratase | VAPA_RS08460 | Not Available | - | 1849930 - 1851051 | 40295.0 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | VAPA_RS08465 | Not Available | - | 1851076 - 1852209 | 41193.2 |
| duf2059 domain-containing protein | VAPA_RS08470 | Not Available | - | 1852211 - 1852798 | 20854.3 |
| dna gyrase subunit a | VAPA_RS08475 | Not Available | - | 1852795 - 1855440 | 98086.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.