Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus B4
Accession NumberNC_022247.1
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | VAPA_RS05900 | Not Available | - | 1317606 - 1318895 | 45906.1 |
| lps translocon maturation chaperone lptm | VAPA_RS33790 | Not Available | - | 1318892 - 1319161 | 8567.37 |
| iron donor protein cyay | VAPA_RS05905 | Not Available | + | 1319174 - 1319506 | 12027.0 |
| penicillin-binding protein 1a | VAPA_RS05910 | Not Available | - | 1319525 - 1321933 | 87626.0 |
| pilus assembly protein pilm | VAPA_RS05915 | Not Available | + | 1322172 - 1323251 | 38976.7 |
| piln domain-containing protein | VAPA_RS05920 | Not Available | + | 1323248 - 1323868 | 22806.7 |
| type 4a pilus biogenesis protein pilo | VAPA_RS05925 | Not Available | + | 1323876 - 1324559 | 25347.2 |
| pilus assembly protein pilp | VAPA_RS05930 | Not Available | + | 1324556 - 1325098 | 20241.4 |
| type iv pilus secretin pilq | VAPA_RS05935 | Not Available | + | 1325095 - 1327233 | 75998.0 |
| shikimate kinase | VAPA_RS05940 | Not Available | + | 1327257 - 1327805 | 20091.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.