Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus B4
Accession NumberNC_022247.1
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gspe/pule family protein | VAPA_RS05555 | Not Available | - | 1240948 - 1242339 | 50076.2 |
| type ii secretion system secretin gspd | VAPA_RS05560 | Not Available | - | 1242345 - 1244663 | 80794.3 |
| type ii secretion system protein n | VAPA_RS05565 | Not Available | - | 1244666 - 1245466 | 28139.9 |
| type ii secretion system protein gspm | VAPA_RS05570 | Not Available | - | 1245477 - 1246010 | 18798.8 |
| type ii secretion system protein gspl | VAPA_RS05575 | Not Available | - | 1246007 - 1247218 | 42694.8 |
| type ii secretion system minor pseudopilin gspk | VAPA_RS05580 | Not Available | - | 1247355 - 1248368 | 35920.0 |
| type ii secretion system protein j | VAPA_RS05585 | Not Available | - | 1248365 - 1249048 | 24831.6 |
| type ii secretion system minor pseudopilin gspi | VAPA_RS05590 | Not Available | - | 1249048 - 1249422 | 13161.0 |
| gsph/fimt family pseudopilin | VAPA_RS05595 | Not Available | - | 1249419 - 1249883 | 15750.0 |
| type ii secretion system major pseudopilin gspg | VAPA_RS05600 | Not Available | - | 1249858 - 1250298 | 15973.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.