Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus B4
Accession NumberNC_022247.1
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | VAPA_RS05310 | Not Available | + | 1183049 - 1184290 | 45185.5 |
| alpha-ketoacid dehydrogenase subunit beta | VAPA_RS05315 | Not Available | + | 1184296 - 1185309 | 36902.0 |
| dihydrolipoamide acetyltransferase family protein | VAPA_RS05320 | Not Available | + | 1185310 - 1186542 | 43326.3 |
| hypothetical protein | VAPA_RS05325 | Not Available | - | 1186571 - 1186825 | 9388.07 |
| tripartite tricarboxylate transporter substrate binding protein | VAPA_RS05330 | Not Available | - | 1186959 - 1187957 | 34871.4 |
| tartrate dehydrogenase | VAPA_RS05335 | Not Available | - | 1188024 - 1189088 | 38499.2 |
| lysr substrate-binding domain-containing protein | VAPA_RS05340 | Not Available | + | 1189200 - 1190129 | 33792.8 |
| four-helix bundle copper-binding protein | VAPA_RS05345 | Not Available | - | 1190156 - 1190485 | 11413.8 |
| lytic murein transglycosylase | VAPA_RS05350 | Not Available | + | 1190631 - 1191953 | 46579.9 |
| putative na+/h+ antiporter | VAPA_RS05355 | Not Available | + | 1192086 - 1193345 | 43967.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.