Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio variabilis
Accession NumberBBMS00000000.1
Gene Summary
Adenine Count
1563099 bp
Thymine Count
1571508 bp
Guanine Count
1340550 bp
Cytosine Count
1322370 bp
Genome Length
5797527 bp
Protein-coding Genes
7911 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homoprotocatechuate degradative operon repressor | JCM19239_3182 | Not Available | - | 5272934 - 5273371 | 16881.4 |
| trap dicarboxylate transporter dctm subunitunknown substrate 3 | JCM19239_3183 | Not Available | - | 5273518 - 5273889 | 13444.5 |
| trap dicarboxylate transporter dctm subunitunknown substrate 3 | JCM19239_3184 | Not Available | - | 5273930 - 5274817 | 31555.3 |
| trap dicarboxylate transporter dctq subunit unknown substrate 3 | JCM19239_3185 | Not Available | - | 5274818 - 5275345 | 19381.1 |
| trap transporter solute receptor unknown substrate 3 | JCM19239_3186 | Not Available | - | 5275351 - 5276376 | 37655.0 |
| 2-keto-4-pentenoate hydratase | JCM19239_3187 | Not Available | + | 5276879 - 5277682 | 29373.3 |
| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | JCM19239_3188 | Not Available | + | 5277692 - 5278336 | 23200.7 |
| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | JCM19239_3189 | Not Available | + | 5278318 - 5278491 | 6277.56 |
| 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase | JCM19239_3190 | Not Available | + | 5278506 - 5278901 | 14658.4 |
| 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase | JCM19239_3191 | Not Available | + | 5278898 - 5279152 | 9399.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
