Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli strain KCJK8829
Accession NumberVESU00000000.1
Gene Summary
Adenine Count
1162164 bp
Thymine Count
1162852 bp
Guanine Count
1211230 bp
Cytosine Count
1194538 bp
Genome Length
4730784 bp
Protein-coding Genes
4311 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | FIB34_20100 | Not Available | - | 4107685 - 4109535 | 71190.0 |
| type vi secretion system baseplate subunit tsse | FIB34_20105 | Not Available | - | 4109539 - 4109952 | 15494.0 |
| type vi secretion system contractile sheath large subunit | FIB34_20110 | Not Available | - | 4109959 - 4111434 | 55705.0 |
| hypothetical protein | FIB34_20115 | Not Available | - | 4111485 - 4111709 | 8411.01 |
| type vi secretion system contractile sheath small subunit | FIB34_20120 | Not Available | - | 4111744 - 4112244 | 18052.4 |
| hcp family type vi secretion system effector | FIB34_20125 | Not Available | + | 4112941 - 4113459 | 19256.8 |
| type vi secretion system tip protein vgrg | FIB34_20130 | Not Available | + | 4113669 - 4115810 | 79810.1 |
| glucose-6-phosphate isomerase | FIB34_20135 | Not Available | - | 4116165 - 4117814 | 61475.1 |
| lysine-sensitive aspartokinase 3 | FIB34_20140 | Not Available | + | 4118339 - 4119688 | 48566.6 |
| zeta toxin | FIB34_20145 | Not Available | + | 4119833 - 4120759 | 34499.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.