Escherichia coli strain KCJK8887

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain KCJK8887
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain KCJK8887

Accession NumberVESI00000000.1

Gene Summary

Adenine Count

1129785 bp

Thymine Count

1128887 bp

Guanine Count

1184966 bp

Cytosine Count

1186536 bp

Genome Length

4630174 bp

Protein-coding Genes

4472 genes

Non-Coding Genes

214 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cys-trna(pro)/cys-trna(cys) deacylase ybakFIB35_02910Not Available-583739 - 58421817093.9
duf3313 domain-containing proteinFIB35_02920Not Available+584748 - 58536922764.1
is200/is605 family element transposase accessory protein tnpbFIB35_02930Not Available+585901 - 58710945743.1
bene family transporter ydcoFIB35_02935Not Available-587149 - 58836342117.8
helix-turn-helix domain-containing proteinFIB35_02940Not Available+588416 - 58895219732.4
23s rrna 5-hydroxycytidine c2501 synthaseFIB35_02945Not Available+589025 - 59098672705.9
duf2554 family proteinFIB35_02950Not Available-591078 - 5913088709.32
type ii toxin-antitoxin system mrna interferase toxin hicaFIB35_02955Not Available+591530 - 5917066782.3
type ii toxin-antitoxin system antitoxin hicbFIB35_02960Not Available+591752 - 59216815247.5
plp-dependent aminotransferase family proteinFIB35_02965Not Available+592247 - 59365352795.8

Displaying genes 681 – 690 of 4686 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites