Escherichia coli strain KCJK8887

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain KCJK8887
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain KCJK8887

Accession NumberVESI00000000.1

Gene Summary

Adenine Count

1129785 bp

Thymine Count

1128887 bp

Guanine Count

1184966 bp

Cytosine Count

1186536 bp

Genome Length

4630174 bp

Protein-coding Genes

4472 genes

Non-Coding Genes

214 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nad-dependent dihydropyrimidine dehydrogenase subunit pretFIB35_07545Not Available-1572965 - 157420344332.0
winged helix-turn-helix transcriptional regulatorFIB35_07550Not Available+1574393 - 157477013944.8
2',3'-cyclic-nucleotide 2'-phosphodiesteraseFIB35_07555Not Available-1574893 - 157683670816.9
3'(2'),5'-bisphosphate nucleotidase cysqFIB35_07560Not Available+1577026 - 157776627205.4
ytfj family proteinFIB35_07565Not Available-1577756 - 157831320618.9
duf1107 domain-containing proteinFIB35_07570Not Available+1578638 - 15788448072.24
hlyc/corc family transporterFIB35_07575Not Available-1578906 - 158024949765.6
peptide-methionine (s)-s-oxide reductase msraFIB35_07580Not Available-1580572 - 158121023316.3
autotransporter assembly complex protein tamaFIB35_07585Not Available+1581416 - 158314964811.7
autotransporter assembly complex protein tambFIB35_07590Not Available+1583146 - 1586925136804.0

Displaying genes 1511 – 1520 of 4686 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites