Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli strain MEZEC42 134
Accession NumberVCYJ00000000.1
Gene Summary
Adenine Count
1166115 bp
Thymine Count
1157423 bp
Guanine Count
1180525 bp
Cytosine Count
1209169 bp
Genome Length
4713232 bp
Protein-coding Genes
4336 genes
Non-Coding Genes
225 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | FG869_20920 | Not Available | - | 4312345 - 4312827 | 18000.5 |
| hypothetical protein | FG869_20925 | Not Available | - | 4312851 - 4314203 | 50726.4 |
| type vi secretion system membrane subunit tssm | FG869_20930 | Not Available | - | 4314214 - 4317648 | 130816.0 |
| type vi secretion system protein tssa | FG869_20935 | Not Available | - | 4317757 - 4319169 | 52362.2 |
| type vi secretion system-associated protein tago | FG869_20940 | Not Available | - | 4319174 - 4319917 | 26442.7 |
| type vi secretion system atpase tssh | FG869_20945 | Not Available | - | 4319914 - 4322673 | 100754.0 |
| dotu family type iv/vi secretion system protein | FG869_20950 | Not Available | - | 4322682 - 4323443 | 29415.8 |
| type vi secretion system baseplate subunit tssk | FG869_20955 | Not Available | - | 4323448 - 4324779 | 49981.9 |
| type vi secretion system lipoprotein tssj | FG869_20960 | Not Available | - | 4324782 - 4325306 | 19395.0 |
| type vi secretion system-associated fha domain protein tagh | FG869_20965 | Not Available | - | 4325303 - 4326583 | 47437.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.