Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas edaphica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas edaphica strain RD25
Accession NumberVBVZ00000000.1
Gene Summary
Adenine Count
1344006 bp
Thymine Count
1355180 bp
Guanine Count
2019007 bp
Cytosine Count
2016787 bp
Genome Length
6734981 bp
Protein-coding Genes
6438 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | FEM54_06370 | Not Available | - | 1374650 - 1375051 | 14396.5 |
| type vi secretion system contractile sheath large subunit | FEM54_06375 | Not Available | - | 1375066 - 1376541 | 55756.2 |
| type vi secretion system contractile sheath small subunit | FEM54_06380 | Not Available | - | 1376568 - 1377065 | 18109.0 |
| type vi secretion system protein tssa | FEM54_06385 | Not Available | - | 1377100 - 1378683 | 60090.1 |
| hcp family type vi secretion system effector | FEM54_06390 | Not Available | + | 1379163 - 1379543 | 14021.7 |
| fad/nad(p)-binding protein | FEM54_06395 | Not Available | - | 1379544 - 1380084 | 19297.2 |
| glycosyltransferase family 2 protein | FEM54_06400 | Not Available | + | 1380643 - 1381617 | 36614.5 |
| dtdp-glucose 4,6-dehydratase | FEM54_06405 | Not Available | + | 1381622 - 1382692 | 40247.1 |
| dtdp-4-dehydrorhamnose reductase | FEM54_06410 | Not Available | + | 1382689 - 1383585 | 32107.1 |
| glucose-1-phosphate thymidylyltransferase rfba | FEM54_06415 | Not Available | + | 1383588 - 1384472 | 32752.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
