Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas edaphica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas edaphica strain RD25
Accession NumberVBVZ00000000.1
Gene Summary
Adenine Count
1344006 bp
Thymine Count
1355180 bp
Guanine Count
2019007 bp
Cytosine Count
2016787 bp
Genome Length
6734981 bp
Protein-coding Genes
6438 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | FEM54_05040 | Not Available | + | 1111400 - 1113577 | 80760.1 |
| response regulator | FEM54_05045 | Not Available | + | 1113574 - 1113936 | 12859.8 |
| type ii toxin-antitoxin system rele/pare family toxin | FEM54_05050 | Not Available | - | 1114210 - 1114329 | 4625.63 |
| type ii toxin-antitoxin system pard family antitoxin | FEM54_05055 | Not Available | - | 1114563 - 1114853 | 10910.0 |
| lysr family transcriptional regulator | FEM54_05060 | Not Available | - | 1115116 - 1116018 | 33163.5 |
| duf1652 domain-containing protein | FEM54_05070 | Not Available | + | 1117181 - 1117438 | 9624.79 |
| hypothetical protein | FEM54_05075 | Not Available | - | 1117601 - 1117798 | 7179.41 |
| cbs domain-containing protein | FEM54_05080 | Not Available | - | 1117860 - 1118273 | 14994.0 |
| duf4142 domain-containing protein | FEM54_05085 | Not Available | - | 1119528 - 1120037 | 17968.2 |
| hypothetical protein | FEM54_05090 | Not Available | + | 1120994 - 1121215 | 8715.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
