Phragmitibacter flavus strain MG-N-17

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Verrucomicrobiia

Order

Verrucomicrobiales

Family

Verrucomicrobiaceae

Genus

Phragmitibacter

Description

Taxonomy

KingdomPseudomonadati
PhylumVerrucomicrobiota
ClassVerrucomicrobiia
OrderVerrucomicrobiales
FamilyVerrucomicrobiaceae
GenusPhragmitibacter
SpeciesPhragmitibacter flavus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phragmitibacter flavus strain MG-N-17

Accession NumberVAUV00000000.1

Gene Summary

Adenine Count

1277244 bp

Thymine Count

1271554 bp

Guanine Count

1684543 bp

Cytosine Count

1677592 bp

Genome Length

5910933 bp

Protein-coding Genes

4729 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rna polymerase sigma factorFEM03_20075Not Available-4911137 - 491198832026.5
hypothetical proteinFEM03_20080Not Available-4911992 - 491278027997.6
lipid-a-disaccharide synthaseFEM03_20085Not Available-4912793 - 491392041065.8
gfo/idh/moca family oxidoreductaseFEM03_20090Not Available-4913917 - 491487935012.5
ion transporterFEM03_20095Not Available-4914953 - 491571728670.3
wd40 repeat domain-containing proteinFEM03_20100Not Available+4915863 - 491719748090.0
5-carboxymethyl-2-hydroxymuconate isomeraseFEM03_20105Not Available+4917246 - 491804628800.6
phytanoyl-coa dioxygenase family proteinFEM03_20110Not Available+4918058 - 491872324295.2
voc family proteinFEM03_20115Not Available-4918720 - 491908513511.8
dehydrogenaseFEM03_20120Not Available-4919107 - 492182497813.1

Displaying genes 3961 – 3970 of 4777 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

22 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001971heptanedioateC7H10O4Chemical structure of heptanedioateNot available
Average158.154Da
Monoisotopic158.059006Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da
BASm00026033-hydroxy-2-methylpropanoyl-CoAC25H38N7O18P3SChemical structure of 3-hydroxy-2-methylpropanoyl-CoANot available
Average849.59Da
Monoisotopic849.1228839Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da

Displaying 1–10 of 22 metabolites