Pseudomonas nitroreducens strain DSM 9128

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas nitroreducens
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas nitroreducens strain DSM 9128

VASG00000000.1

Gene Summary

Adenine Count

1152083 bp

Thymine Count

1164173 bp

Guanine Count

2198441 bp

Cytosine Count

2192830 bp

Genome Length

6707527 bp

Protein-coding Genes

5920 genes

Non-Coding Genes

218 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
histone deacetylase family proteinFEA48_04600Not Available+1007965 - 100900537785.4
extracellular solute-binding proteinFEA48_04605Not Available+1009093 - 101019040067.7
dmt family transporterFEA48_04610Not Available+1010334 - 101127233734.2
mbl fold metallo-hydrolaseFEA48_04615Not Available-1011640 - 101236527415.1
5-guanidino-2-oxopentanoate decarboxylaseFEA48_04620Not Available-1012696 - 101429757304.2
sodium:solute symporterFEA48_04625Not Available-1014394 - 101577348877.4
cytosine permeaseFEA48_04630Not Available-1015907 - 101742153590.0
duf4440 domain-containing proteinFEA48_04635Not Available-1017447 - 101785715499.0
agmatinaseFEA48_04640Not Available-1017874 - 101883334871.1
lysr family transcriptional regulatorFEA48_04645Not Available+1019123 - 102001933331.2

Displaying genes 1131 – 1140 of 6138 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

334 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002026acrylateC3H3O2Chemical structure of acrylate10344-93-1
Average71.056Da
Monoisotopic71.013852917Da

Displaying 1–10 of 334 metabolites