Polaribacter aestuariivivens strain DBTF-3

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter aestuariivivens
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter aestuariivivens strain DBTF-3

Accession NumberVANR00000000.1

Gene Summary

Adenine Count

1122084 bp

Thymine Count

1113725 bp

Guanine Count

469720 bp

Cytosine Count

473036 bp

Genome Length

3178572 bp

Protein-coding Genes

2730 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
fasciclin domain-containing proteinFDT66_12760Not Available+2910392 - 291097320510.8
acyl-coa thioesteraseFDT66_12765Not Available-2911037 - 291158520440.6
6-phosphogluconate dehydrogenaseFDT66_12770Not Available-2911591 - 291195914149.3
t9ss type a sorting domain-containing proteinFDT66_12775Not Available+2912174 - 291295927736.1
glucose-1-phosphate thymidylyltransferaseFDT66_12780Not Available+2913061 - 291423644048.2
duf2807 domain-containing proteinFDT66_12785Not Available-2914330 - 291512128047.4
hypothetical proteinFDT66_12790Not Available-2915093 - 291617240540.5
duf3379 domain-containing proteinFDT66_12795Not Available-2916156 - 291668020634.8
rna polymerase sigma factorFDT66_12800Not Available-2916670 - 291723922178.7
trna 2-thiocytidine(32) synthetase ttcaFDT66_12805Not Available-2917362 - 291815330147.7

Displaying genes 2541 – 2550 of 2774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

6 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da

Displaying 1–6 of 6 metabolites