Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter periplasmic protein lptc | FD718_03910 | Not Available | - | 840019 - 840582 | 21121.9 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | FD718_03915 | Not Available | - | 840579 - 841136 | 20448.6 |
| kpsf/gutq family sugar-phosphate isomerase | FD718_03920 | Not Available | - | 841136 - 842104 | 34379.2 |
| calcium/sodium antiporter | FD718_03925 | Not Available | - | 842121 - 843086 | 33681.6 |
| phospholipid abc transporter atp-binding protein mlaf | FD718_03930 | Not Available | + | 843529 - 844341 | 29281.4 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | FD718_03935 | Not Available | + | 844370 - 845152 | 27929.0 |
| outer membrane lipid asymmetry maintenance protein mlad | FD718_03940 | Not Available | + | 845178 - 845657 | 17098.7 |
| phospholipid-binding protein mlac | FD718_03945 | Not Available | + | 845667 - 846302 | 23994.2 |
| stas domain-containing protein | FD718_03950 | Not Available | + | 846305 - 846616 | 11721.2 |
| bola family transcriptional regulator | FD718_03955 | Not Available | + | 846636 - 846890 | 9341.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.