Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated protein | FD718_03860 | Not Available | - | 831635 - 832159 | 20684.2 |
| metalloprotease pmba | FD718_03865 | Not Available | + | 832271 - 833614 | 48271.0 |
| magnesium transporter | FD718_03870 | Not Available | - | 833710 - 835068 | 49198.4 |
| hpr family phosphocarrier protein | FD718_03875 | Not Available | - | 835329 - 835601 | 9644.51 |
| rnase adapter rapz | FD718_03880 | Not Available | - | 835598 - 836449 | 32291.8 |
| pts iia-like nitrogen regulatory protein ptsn | FD718_03885 | Not Available | - | 836486 - 836935 | 16466.7 |
| ribosome hibernation promoting factor | FD718_03890 | Not Available | - | 836938 - 837225 | 10868.0 |
| rna polymerase factor sigma-54 | FD718_03895 | Not Available | - | 837262 - 838725 | 54850.8 |
| lps export abc transporter atp-binding protein | FD718_03900 | Not Available | - | 838797 - 839522 | 26918.6 |
| lipopolysaccharide transport periplasmic protein lpta | FD718_03905 | Not Available | - | 839532 - 840038 | 18768.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.