Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine-sensitive aspartokinase 3 | FD718_03710 | Not Available | - | 792188 - 793567 | 49440.5 |
| alanine--glyoxylate aminotransferase family protein | FD718_03715 | Not Available | + | 794118 - 795236 | 40627.0 |
| ligase | FD718_03720 | Not Available | - | 795290 - 797041 | 66609.0 |
| excinuclease abc subunit uvra | FD718_03725 | Not Available | - | 797194 - 800019 | 104068.0 |
| single-stranded dna-binding protein | FD718_03730 | Not Available | + | 800286 - 800834 | 20102.5 |
| rnase e specificity factor csrd | FD718_03735 | Not Available | + | 800982 - 802922 | 73237.8 |
| msha biogenesis protein mshi | FD718_03740 | Not Available | + | 803087 - 804538 | 54257.4 |
| msha biogenesis protein mshj | FD718_03745 | Not Available | + | 804535 - 805170 | 23921.1 |
| msha biogenesis protein mshk | FD718_03750 | Not Available | + | 805199 - 805486 | 10382.4 |
| pilus (msha type) biogenesis protein mshl | FD718_03755 | Not Available | + | 805500 - 807194 | 60542.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.