Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | FD718_03610 | Not Available | + | 764492 - 766906 | 89779.5 |
| valine--pyruvate transaminase | FD718_03615 | Not Available | - | 766953 - 768203 | 46658.2 |
| glycine--trna ligase subunit beta | FD718_03620 | Not Available | - | 768424 - 770493 | 75858.9 |
| glycine--trna ligase subunit alpha | FD718_03625 | Not Available | - | 770503 - 771414 | 34799.4 |
| ompa family lipoprotein | FD718_03630 | Not Available | + | 771704 - 772393 | 23540.0 |
| tmem165/gdt1 family protein | FD718_03635 | Not Available | + | 772659 - 773255 | 21145.7 |
| hypothetical protein | FD718_03640 | Not Available | + | 773379 - 773633 | 10035.6 |
| collagenase | FD718_03645 | Not Available | + | 773773 - 776175 | 90415.5 |
| sulfurtransferase tusa | FD718_03650 | Not Available | - | 776259 - 776510 | 9371.48 |
| hypothetical protein | FD718_03655 | Not Available | + | 776653 - 776838 | 6931.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.