Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis outer membrane usher protein | FD718_03060 | Not Available | - | 642554 - 644962 | 89331.5 |
| type 1 fimbrial protein | FD718_03065 | Not Available | - | 644975 - 645535 | 20265.1 |
| type 1 fimbrial protein | FD718_03070 | Not Available | - | 645578 - 646138 | 19180.5 |
| marc family protein | FD718_03075 | Not Available | - | 646533 - 647183 | 22693.4 |
| eal domain-containing protein | FD718_03080 | Not Available | - | 647319 - 648785 | 55703.1 |
| helix-turn-helix transcriptional regulator | FD718_03085 | Not Available | - | 649313 - 649621 | 12141.9 |
| nadh:ubiquinone oxidoreductase | FD718_03090 | Not Available | - | 650214 - 650573 | 13319.9 |
| formate dehydrogenase subunit alpha | FD718_03095 | Not Available | - | 650713 - 654870 | 152037.0 |
| cupin domain-containing protein | FD718_03100 | Not Available | - | 655236 - 655604 | 13813.1 |
| hypothetical protein | FD718_03105 | Not Available | + | 656255 - 656872 | 23895.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.