Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | FD718_02100 | Not Available | + | 409810 - 411969 | 83881.4 |
| peptide-methionine (s)-s-oxide reductase msra | FD718_02105 | Not Available | + | 411987 - 412616 | 23304.4 |
| atp-dependent protease | FD718_02110 | Not Available | - | 412692 - 415064 | 88695.6 |
| hypothetical protein | FD718_02115 | Not Available | - | 415687 - 416052 | 12916.0 |
| hypothetical protein | FD718_02120 | Not Available | - | 416226 - 417104 | 32959.2 |
| porin family protein | FD718_02125 | Not Available | - | 417254 - 417988 | 26791.4 |
| stas/sec14 domain-containing protein | FD718_02130 | Not Available | - | 418140 - 418520 | 14356.0 |
| lysr family transcriptional regulator | FD718_02135 | Not Available | + | 418705 - 419637 | 34893.4 |
| nopaline dehydrogenase | FD718_02140 | Not Available | + | 419841 - 420950 | 40234.4 |
| yfcc family protein | FD718_02145 | Not Available | + | 421021 - 422427 | 49955.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.